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Classification of Transcription Factors in Mammalia
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Family:
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1 Basic domains
2 Zinc-coordinating DNA-binding domains
3 Helix-turn-helix domains
3.1 Homeo domain factors
3.2 Paired box factors
3.3 Fork head / winged helix factors
3.3.1 FOX
3.3.1.1 FOXA
3.3.1.2 FOXB
3.3.1.3 FOXC
3.3.1.4 FOXD
3.3.1.4.1 FOXD1
3.3.1.4.2 FOXD2
3.3.1.4.3 FOXD3
3.3.1.4.4 FOXD4 (FOXD4a, FOXD4b)
3.3.1.4.5 FOXD4L1
3.3.1.4.7 FOXD4L3
3.3.1.4.8 FOXD4L4
3.3.1.4.9 FOXD4L5
3.3.1.4.10 FOXD4L6
3.3.1.5 FOXE
3.3.1.6 FOXF
3.3.1.7 FOXG
3.3.1.8 FOXH
3.3.1.9 FOXI
3.3.1.10 FOXJ
3.3.1.11 FOXK
3.3.1.12 FOXL
3.3.1.13 FOXM
3.3.1.14 FOXN
3.3.1.15 FOXO
3.3.1.16 FOXP
3.3.1.17 FOXQ
3.3.1.18 FOXR
3.3.1.19 FOXS
3.3.2 E2F
3.3.3 RFX
3.4 Heat shock factors
3.5 Tryptophan cluster factors
3.6 TEA domain factors
3.7 ARID
4 Other all-alpha-helical DNA-binding domains
5 alpha-Helices exposed by beta-structures
6 Immunoglobulin fold
7 beta-Hairpin exposed by an alpha/beta-scaffold
8 beta-Sheet binding to DNA
9 beta-Barrel DNA-binding domains
0 Yet undefined DNA-binding domains
General
Species within this Genus:
13
LOGO plot of the DNA binding sequence
Species specific reports
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