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Classification of Transcription Factors in Mammalia

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Superclass: , Class: ,
Family: , Subfamily: , Genus: ,
  • 3 Helix-turn-helix domains
    • 3.1 Homeo domain factors
      • 3.1.9 HD-CUT
        • 3.1.9.1 ONECUT
General

Species within this Genus: 34 LOGO plot of the DNA binding sequence LOGO plot

Species specific reports

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Bos taurus

Synonyms: cattle, domestic cow

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Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

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Canis lupus familiaris

Synonyms: dog, dogs

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Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

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Choloepus hoffmanni

Synonyms: Hoffmann's two-fingered sloth, Hoffmann's two-toed sloth

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Dasypus novemcinctus

Synonyms: nine-banded armadillo

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Echinops telfairi

Synonyms: small Madagascar hedgehog, lesser hedgehog tenrec

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Equus caballus

Synonyms: horse, equine

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Felis catus

Synonyms: domestic cat, cats

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Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

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Homo sapiens

Synonyms: human, man

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Protein expression pattern:Show table
Isoforms and DNA binding domain
Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

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Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

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Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

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Macropus eugenii

Synonyms: tammar wallaby

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Microcebus murinus

Synonyms: gray mouse lemur, grey mouse lemur

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Monodelphis domestica

Synonyms: gray short-tailed opossum

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Mus musculus

Synonyms: house mouse, mouse

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Isoforms and DNA binding domain
Mustela putorius furo

Synonyms: domestic ferret, ferret

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Myotis lucifugus

Synonyms: little brown bat

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Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

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Ochotona princeps

Synonyms: American pika, southern American pika

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Oryctolagus cuniculus

Synonyms: rabbit, rabbits

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Otolemur garnettii

Synonyms: small-eared galago

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Pan troglodytes

Synonyms: chimpanzee

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Pongo abelii

Synonyms: Sumatran orangutan, orang utan

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Procavia capensis

Synonyms: Cape rock hyrax, rock hyrax

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Rattus norvegicus

Synonyms: Norway rat, rats

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Isoforms and DNA binding domain
Sarcophilus harrisii

Synonyms: Tasmanian devil

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Sus scrofa

Synonyms: pig, wild boar

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Tarsius syrichta

Synonyms: Philippine tarsier

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Tupaia belangeri

Synonyms: northern tree shrew, common tree shrew

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Tursiops truncatus

Synonyms: bottlenose dolphin, bottle-nosed dolphin

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Vicugna pacos

Synonyms: alpaca

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Expression table
The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology
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TissueCell typeExpression levelTypeReliability
adrenal glandglandular tissueNegativeStainingUncertain
appendixglandular tissueNegativeStainingUncertain
bone barrowhematopoetic stem cellNegativeStainingUncertain
breastglandular tissueNegativeStainingUncertain
bronchiciliated call with propulsive function of respiratory tractNegativeStainingUncertain
cerebellumgranule cellNegativeStainingUncertain
cerebellumNegativeStainingUncertain
cerebellumpurkinje cellWeakStainingUncertain
cerebral cortexglial cell of central nervous systemNegativeStainingUncertain
cerebral cortexneuronNegativeStainingUncertain
cervix of uterusglandular tissueNegativeStainingUncertain
cervix of uterussquamous epithelial cellNegativeStainingUncertain
colonglandular tissueNegativeStainingUncertain
duodenumglandular tissueWeakStainingUncertain
epididymisglandular tissueNegativeStainingUncertain
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