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Classification of Transcription Factors in Mammalia

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Superclass: , Class: ,
Family: , Subfamily: , Genus: ,
  • 3 Helix-turn-helix domains
    • 3.1 Homeo domain factors
      • 3.1.6 HD-SINE
        • 3.1.6.1 SIX1-like
General

Species within this Genus: 39

Species specific reports

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Ailuropoda melanoleuca

Synonyms: giant panda

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Isoforms and DNA binding domain
Bos taurus

Synonyms: cattle, domestic cow

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Isoforms and DNA binding domain
Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

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Isoforms and DNA binding domain
Canis lupus familiaris

Synonyms: dog, dogs

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Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

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Choloepus hoffmanni

Synonyms: Hoffmann's two-fingered sloth, Hoffmann's two-toed sloth

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Dasypus novemcinctus

Synonyms: nine-banded armadillo

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Echinops telfairi

Synonyms: small Madagascar hedgehog, lesser hedgehog tenrec

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Equus caballus

Synonyms: horse, equine

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Erinaceus europaeus

Synonyms: western European hedgehog, common hedgehog

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Felis catus

Synonyms: domestic cat, cats

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Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

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Isoforms and DNA binding domain
Homo sapiens

Synonyms: human, man

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Protein expression pattern:Show table
Isoforms and DNA binding domain
Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

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Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

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Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

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Macropus eugenii

Synonyms: tammar wallaby

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Microcebus murinus

Synonyms: gray mouse lemur, grey mouse lemur

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Monodelphis domestica

Synonyms: gray short-tailed opossum

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Mus musculus

Synonyms: house mouse, mouse

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Isoforms and DNA binding domain
Mustela putorius furo

Synonyms: domestic ferret, ferret

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Myotis lucifugus

Synonyms: little brown bat

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Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

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Ochotona princeps

Synonyms: American pika, southern American pika

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Ornithorhynchus anatinus

Synonyms: platypus, duckbill platypus

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Oryctolagus cuniculus

Synonyms: rabbit, rabbits

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Otolemur garnettii

Synonyms: small-eared galago

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Ovis aries

Synonyms: sheep, wild sheep

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Pan troglodytes

Synonyms: chimpanzee

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Isoforms and DNA binding domain
Pongo abelii

Synonyms: Sumatran orangutan, orang utan

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Procavia capensis

Synonyms: Cape rock hyrax, rock hyrax

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Pteropus vampyrus

Synonyms: large flying fox

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Rattus norvegicus

Synonyms: Norway rat, rats

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Isoforms and DNA binding domain
Sarcophilus harrisii

Synonyms: Tasmanian devil

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Sorex araneus

Synonyms: European shrew, Eurasian shrew

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Sus scrofa

Synonyms: pig, wild boar

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Isoforms and DNA binding domain
Tarsius syrichta

Synonyms: Philippine tarsier

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Tupaia belangeri

Synonyms: northern tree shrew, common tree shrew

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Tursiops truncatus

Synonyms: bottlenose dolphin, bottle-nosed dolphin

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Expression table
The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology
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TissueCell typeExpression levelTypeReliability
adrenal glandglandular tissueNegativeStainingUncertain
appendixglandular tissueNegativeStainingUncertain
appendixlymphoid tissueNegativeStainingUncertain
bone barrowhematopoetic stem cellNegativeStainingUncertain
breastglandular tissueNegativeStainingUncertain
bronchiciliated call with propulsive function of respiratory tractModerateStainingUncertain
cerebellumgranule cellNegativeStainingUncertain
cerebellumNegativeStainingUncertain
cerebellumpurkinje cellNegativeStainingUncertain
cerebral cortexglial cell of central nervous systemNegativeStainingUncertain
cerebral cortexneuronNegativeStainingUncertain
cervix of uterusglandular tissueStrongStainingUncertain
cervix of uterussquamous epithelial cellNegativeStainingUncertain
colonglandular tissueNegativeStainingUncertain
duodenumglandular tissueNegativeStainingUncertain
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