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Classification of Transcription Factors in Mammalia

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1 Basic domains
- 1.1 Basic leucine zipper factors (bZIP)
- 1.2 Basic helix-loop-helix factors (bHLH)
  - 1.2.1 E2A
  - 1.2.2 MyoD-ASC-related
  - 1.2.3 Tal-related
    - 1.2.3.1 TAL-HEN
      - 1.2.3.1.1 TAL1
      - 1.2.3.1.2 TAL2
      - 1.2.3.1.3 LYL1
      - 1.2.3.1.4 HEN1 (NHLH1)
      - 1.2.3.1.5 HEN2 (NHLH2)
    - 1.2.3.2 TWIST
    - 1.2.3.3 MESP
    - 1.2.3.4 Neurogenin-ATO
    - 1.2.3.5 BHLHA9
  - 1.2.4 Hairy-related
  - 1.2.5 PAS
  - 1.2.6 bHLH-ZIP
  - 1.2.8 HLH only
- 1.3 Basic helix-span-helix factors (bHSH)
2 Zinc-coordinating DNA-binding domains
3 Helix-turn-helix domains
4 Other all-alpha-helical DNA-binding domains
5 alpha-Helices exposed by beta-structures
6 Immunoglobulin fold
7 beta-Hairpin exposed by an alpha/beta-scaffold
8 beta-Sheet binding to DNA
9 beta-Barrel DNA-binding domains
0 Yet undefined DNA-binding domains

General

Species within this Genus: 24 LOGO plot of the DNA binding sequence

Species specific reports

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Ailuropoda melanoleuca

Synonyms: giant panda

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Bos taurus

Synonyms: cattle, domestic cow

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Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

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Canis lupus familiaris

Synonyms: dog, dogs

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Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

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Dipodomys ordii

Synonyms: Ord's kangaroo rat

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Equus caballus

Synonyms: horse, equine

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Erinaceus europaeus

Synonyms: western European hedgehog, common hedgehog

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Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

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Homo sapiens

Synonyms: human, man

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BioGPS: ENSG00000171786
ProteinAtlas: ENSG00000171786 ( with antibody)
TRANSFAC: T01654

Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

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Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

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Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

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Monodelphis domestica

Synonyms: gray short-tailed opossum

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Mus musculus

Synonyms: house mouse, mouse

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TRANSFAC: T01655

Mustela putorius furo

Synonyms: domestic ferret, ferret

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Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

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Otolemur garnettii

Synonyms: small-eared galago

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Pan troglodytes

Synonyms: chimpanzee

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Pongo abelii

Synonyms: Sumatran orangutan, orang utan

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Rattus norvegicus

Synonyms: Norway rat, rats

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Sarcophilus harrisii

Synonyms: Tasmanian devil

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Sus scrofa

Synonyms: pig, wild boar

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Tarsius syrichta

Synonyms: Philippine tarsier

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Ailuropoda melanoleuca, giant panda
Bos taurus, cattle
Callithrix jacchus, white-tufted-ear marmoset
Canis lupus familiaris, dog
Cavia porcellus, domestic guinea pig
Choloepus hoffmanni, Hoffmann's two-fingered sloth
Dasypus novemcinctus, nine-banded armadillo
Dipodomys ordii, Ord's kangaroo rat
Echinops telfairi, small Madagascar hedgehog
Equus caballus, horse
Erinaceus europaeus, western European hedgehog
Felis catus, domestic cat
Gorilla gorilla gorilla, western lowland gorilla
Homo sapiens, human
Ictidomys tridecemlineatus, thirteen-lined ground squirrel
Loxodonta africana, African savanna elephant
Macaca mulatta, Rhesus monkey
Macropus eugenii, tammar wallaby
Microcebus murinus, gray mouse lemur
Monodelphis domestica, gray short-tailed opossum
Mus musculus, house mouse
Mustela putorius furo, domestic ferret
Myotis lucifugus, little brown bat
Nomascus leucogenys, northern white-cheeked gibbon
Ochotona princeps, American pika
Ornithorhynchus anatinus, platypus
Oryctolagus cuniculus, rabbit
Otolemur garnettii, small-eared galago
Ovis aries, sheep
Pan troglodytes, chimpanzee
Pongo abelii, Sumatran orangutan
Procavia capensis, Cape rock hyrax
Pteropus vampyrus, large flying fox
Rattus norvegicus, Norway rat
Sarcophilus harrisii, Tasmanian devil
Sorex araneus, European shrew
Sus scrofa, pig
Tarsius syrichta, Philippine tarsier
Tupaia belangeri, northern tree shrew
Tursiops truncatus, bottlenose dolphin
Vicugna pacos, alpaca

Expression table

The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology