Classification of Transcription Factors in Mammalia

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1 Basic domains
- 1.1 Basic leucine zipper factors (bZIP)
- 1.2 Basic helix-loop-helix factors (bHLH)
  - 1.2.1 E2A
  - 1.2.2 MyoD-ASC-related
  - 1.2.3 Tal-related
    - 1.2.3.1 TAL-HEN
      - 1.2.3.1.1 TAL1
      - 1.2.3.1.2 TAL2
      - 1.2.3.1.3 LYL1
      - 1.2.3.1.4 HEN1 (NHLH1)
      - 1.2.3.1.5 HEN2 (NHLH2)
    - 1.2.3.2 TWIST
    - 1.2.3.3 MESP
    - 1.2.3.4 Neurogenin-ATO
    - 1.2.3.5 BHLHA9
  - 1.2.4 Hairy-related
  - 1.2.5 PAS
  - 1.2.6 bHLH-ZIP
  - 1.2.8 HLH only
- 1.3 Basic helix-span-helix factors (bHSH)
2 Zinc-coordinating DNA-binding domains
3 Helix-turn-helix domains
4 Other all-alpha-helical DNA-binding domains
5 alpha-Helices exposed by beta-structures
6 Immunoglobulin fold
7 beta-Hairpin exposed by an alpha/beta-scaffold
8 beta-Sheet binding to DNA
9 beta-Barrel DNA-binding domains
0 Yet undefined DNA-binding domains

General

Species within this Genus: 24 LOGO plot of the DNA binding sequence

Species specific reports

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Ailuropoda melanoleuca

Synonyms: giant panda

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Bos taurus

Synonyms: cattle, domestic cow

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Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

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Canis lupus familiaris

Synonyms: dog, dogs

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Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

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Dipodomys ordii

Synonyms: Ord's kangaroo rat

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Equus caballus

Synonyms: horse, equine

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Erinaceus europaeus

Synonyms: western European hedgehog, common hedgehog

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Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

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Homo sapiens

Synonyms: human, man

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BioGPS: ENSG00000171786
ProteinAtlas: ENSG00000171786 ( with antibody)
TRANSFAC: T01654

Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

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Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

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Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

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Monodelphis domestica

Synonyms: gray short-tailed opossum

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Mus musculus

Synonyms: house mouse, mouse

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TRANSFAC: T01655

Mustela putorius furo

Synonyms: domestic ferret, ferret

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Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

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Otolemur garnettii

Synonyms: small-eared galago

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Pan troglodytes

Synonyms: chimpanzee

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Pongo abelii

Synonyms: Sumatran orangutan, orang utan

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Rattus norvegicus

Synonyms: Norway rat, rats

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Sarcophilus harrisii

Synonyms: Tasmanian devil

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Sus scrofa

Synonyms: pig, wild boar

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Tarsius syrichta

Synonyms: Philippine tarsier

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