Transcription factor classification

Status

Please wait ...

Searches in the label, ID and external references.

Superclass:

, Class:

,
Family:

, Subfamily:

, Genus:

1 Basic domains
2 Zinc-coordinating DNA-binding domains
- 2.1 Nuclear receptors with C4 zinc fingers
- 2.2 Other C4 zinc finger-type factors
- 2.3 C2H2 zinc finger factors
  - 2.3.1 Three-zinc finger Krüppel-related
  - 2.3.2 Other factors with up to three adjacent zinc fingers
  - 2.3.3 More than 3 adjacent zinc fingers
    - 2.3.3.1 GLI-lile
    - 2.3.3.2 Snail-like
    - 2.3.3.3 ZFP91-like
    - 2.3.3.4 ZNF280-like
    - 2.3.3.5 ZSCAN5-like
    - 2.3.3.6 ZNF75-like
    - 2.3.3.7 ZNF705
    - 2.3.3.8 ZBTB7
    - 2.3.3.9 YY1-like
    - 2.3.3.10 ZNF24-like
    - 2.3.3.11 ZBTB6-like
    - 2.3.3.12 PRDM1-like
    - 2.3.3.13 ZNF148-like
    - 2.3.3.14 ZBTB20-like
    - 2.3.3.15 ZNF524-like
    - 2.3.3.16 ZNF238-like
    - 2.3.3.17 OVOL
    - 2.3.3.18 ZNF56-like
    - 2.3.3.19 ZNF500-like
    - 2.3.3.20 FEZF
    - 2.3.3.21 GFI1
      - 2.3.3.21.1 GFI1
      - 2.3.3.21.2 GFI1B
    - 2.3.3.22 BCL6
    - 2.3.3.23 ZNF212-like
    - 2.3.3.24 MTF1-like
    - 2.3.3.25 PLAG
    - 2.3.3.26 ZKSCAN3-like
    - 2.3.3.27 ZNF525-like
    - 2.3.3.28 ZNF76-like
    - 2.3.3.29 ZNF652-like
    - 2.3.3.30 ZNF350-like
    - 2.3.3.31 ZNF642-like
    - 2.3.3.32 ZNF679-like
    - 2.3.3.33 ZNF763-like
    - 2.3.3.34 ZNF3-like
    - 2.3.3.35 ZNF620-like
    - 2.3.3.36 ZNF324
    - 2.3.3.37 ZNF362-like
    - 2.3.3.38 ZNF282-like
    - 2.3.3.39 ZNF764-like
    - 2.3.3.40 ZNF177-like
    - 2.3.3.41 ZNF32-like
    - 2.3.3.42 ZNF773-like
    - 2.3.3.43 ZNF558-like
    - 2.3.3.44 ZNF302-like
    - 2.3.3.45 ZNF562-like
    - 2.3.3.46 ZXD
    - 2.3.3.47 ZNF222-like
    - 2.3.3.48 ZNF736-like
    - 2.3.3.49 ZNF286
    - 2.3.3.50 CTCF-like
    - 2.3.3.51 ZNF366-like
    - 2.3.3.52 ZNF322-like
    - 2.3.3.53 ZNF548-like
    - 2.3.3.54 ZNF460-like
    - 2.3.3.55 ZNF146-like
    - 2.3.3.56 ZNF214-like
    - 2.3.3.57 ZNF479-like
    - 2.3.3.58 ZNF180-like
    - 2.3.3.59 ZNF100-like
    - 2.3.3.60 ZNF98-like
    - 2.3.3.61 ZNF343-like
    - 2.3.3.62 ZFP2-like
    - 2.3.3.63 ZFP30-like
    - 2.3.3.64 ZNF354A-like
    - 2.3.3.65 ZFX-ZFY
    - 2.3.3.66 ZNF689-like
    - 2.3.3.67 ZNF283-like
    - 2.3.3.68 ZNF81-like
    - 2.3.3.69 ZNF25-like
    - 2.3.3.70 ZNF26-like
    - 2.3.3.71 ZNF300-like
    - 2.3.3.72 ZNF813-like
    - 2.3.3.73 ZNF816A-like
    - 2.3.3.74 ZNF442-like
    - 2.3.3.75 ZNF432-like
    - 2.3.3.76 ZNF665-like
    - 2.3.3.77 ZNF595-like
    - 2.3.3.78 ZNF14-like
    - 2.3.3.79 ZNF841-like
    - 2.3.3.80 ZNF99-like
    - 2.3.3.0.1 ZFP161
    - 2.3.3.0.10 ZNF781
    - 2.3.3.0.11 ZNF114
    - 2.3.3.0.12 ZNF589
    - 2.3.3.0.13 ZNF22
    - 2.3.3.0.14 ZNF713
    - 2.3.3.0.15 ZSCAN16
    - 2.3.3.0.20 ZNF18
    - 2.3.3.0.21 WT1
    - 2.3.3.0.23 PRDM6
    - 2.3.3.0.24 ZNF444
    - 2.3.3.0.25 ZNF641
    - 2.3.3.0.26 ZNF746
    - 2.3.3.0.27 ZIM2
    - 2.3.3.0.31 ZNF655
    - 2.3.3.0.32 ZNF165
    - 2.3.3.0.34 ZNF131
    - 2.3.3.0.35 PRDM14
    - 2.3.3.0.37 ZNF575
    - 2.3.3.0.38 ZBTB49
    - 2.3.3.0.39 ZNF691
    - 2.3.3.0.43 ZSCAN30
    - 2.3.3.0.45 ZNF80
    - 2.3.3.0.46 ZNF514
    - 2.3.3.0.47 ZSCAN21
    - 2.3.3.0.54 MYNN
    - 2.3.3.0.55 ZBTB24
    - 2.3.3.0.57 ZFP92
    - 2.3.3.0.58 ZNF205
    - 2.3.3.0.59 ZNF837
    - 2.3.3.0.67 ZNF584
    - 2.3.3.0.68 ZNF684
    - 2.3.3.0.69 ZNF187
    - 2.3.3.0.70 ZSCAN22
    - 2.3.3.0.71 ZNF550
    - 2.3.3.0.78 ZNF696
    - 2.3.3.0.79 ZNF263
    - 2.3.3.0.80 ZNF556
    - 2.3.3.0.81 ZNF192
    - 2.3.3.0.82 ZNF391
    - 2.3.3.0.83 ZNF239
    - 2.3.3.0.91 ZNF660
    - 2.3.3.0.92 GZF1
    - 2.3.3.0.93 ZNF408
    - 2.3.3.0.94 ZNF648
    - 2.3.3.0.95 ZNF768
    - 2.3.3.0.100 ZNF35
    - 2.3.3.0.101 ZNF483
    - 2.3.3.0.102 ZBTB48
    - 2.3.3.0.103 ZNF275
    - 2.3.3.0.104 ZIM3
    - 2.3.3.0.106 ZNF596
    - 2.3.3.0.111 ZNF718
    - 2.3.3.0.112 ZNF121
    - 2.3.3.0.113 ZNF485
    - 2.3.3.0.114 ZNF354C
    - 2.3.3.0.115 ZNF586
    - 2.3.3.0.118 ZNF10
    - 2.3.3.0.119 ZNF19
    - 2.3.3.0.123 ZBTB40
    - 2.3.3.0.124 ZBTB11
    - 2.3.3.0.125 ZNF454
    - 2.3.3.0.126 ZNF154
    - 2.3.3.0.127 ZNF416
    - 2.3.3.0.130 ZNF34
    - 2.3.3.0.136 ZNF320
    - 2.3.3.0.142 ZNF331
    - 2.3.3.0.148 ZNF329
    - 2.3.3.0.149 ZFP90
    - 2.3.3.0.150 ZNF317
    - 2.3.3.0.159 ZNF167
    - 2.3.3.0.160 ZNF250
    - 2.3.3.0.161 ZNF623
    - 2.3.3.0.162 ZFP3
    - 2.3.3.0.165 ZNF266
    - 2.3.3.0.166 ZNF311
    - 2.3.3.0.173 ZNF880
    - 2.3.3.0.174 ZNF287
    - 2.3.3.0.180 ZNF549
    - 2.3.3.0.183 ZNF676
    - 2.3.3.0.186 ZNF267
    - 2.3.3.0.191 ZNF471
    - 2.3.3.0.192 ZFP28
    - 2.3.3.0.193 ZNF182
    - 2.3.3.0.195 PRDM5
    - 2.3.3.0.196 RBAK
    - 2.3.3.0.197 ZNF189
    - 2.3.3.0.202 ZNF135
    - 2.3.3.0.210 ZNF23
    - 2.3.3.0.215 ZNF569
    - 2.3.3.0.216 ZNF84
    - 2.3.3.0.220 ZNF184
    - 2.3.3.0.221 ZNF441
    - 2.3.3.0.224 ZNF433
    - 2.3.3.0.225 ZNF337
    - 2.3.3.0.226 ZNF726
    - 2.3.3.0.227 ZNF624
    - 2.3.3.0.228 ZNF197
    - 2.3.3.0.232 ZNF594
    - 2.3.3.0.233 ZNF107
    - 2.3.3.0.234 ZNF208
    - 2.3.3.0 unclassified
    - 2.3.3.0.3 ZNF496
    - 2.3.3.0.6 ZNF274
    - 2.3.3.0.7 ZNF200
    - 2.3.3.0.9 OSR2
    - 2.3.3.0.16 ZNF793
    - 2.3.3.0.17 ZFP41
    - 2.3.3.0.18 ZNF215
    - 2.3.3.0.28 ZBTB44
    - 2.3.3.0.30 ZNF576
    - 2.3.3.0.40 ZNF394
    - 2.3.3.0.41 ZNF449
    - 2.3.3.0.42 ZNF498 (ZSCAN25)
    - 2.3.3.0.51 ZNF707
    - 2.3.3.0.60 ZNF202
    - 2.3.3.0.61 ZNF789
    - 2.3.3.0.62 ZNF662
    - 2.3.3.0.63 ZNF554
    - 2.3.3.0.64 ZNF506
    - 2.3.3.0.72 ZFP1
    - 2.3.3.0.74 ZBTB16
    - 2.3.3.0.75 GTF3A
    - 2.3.3.0.76 ZFP64
    - 2.3.3.0.77 ZNF358
    - 2.3.3.0.84 ZNF664
    - 2.3.3.0.87 ZNF501
    - 2.3.3.0.89 ZNF610
    - 2.3.3.0.96 ZNF517
    - 2.3.3.0.97 ZNF547
    - 2.3.3.0.98 ZNF766
    - 2.3.3.0.99 ZNF677
    - 2.3.3.0.109 ZNF682
    - 2.3.3.0.110 ZNF141
    - 2.3.3.0.120 ZSCAN12
    - 2.3.3.0.121 ZNF70
    - 2.3.3.0.122 ZNF79
    - 2.3.3.0.132 ZNF74
    - 2.3.3.0.133 ZNF415
    - 2.3.3.0.134 ZNF480
    - 2.3.3.0.143 ZNF461
    - 2.3.3.0.145 ZNF529
    - 2.3.3.0.146 ZNF565
    - 2.3.3.0.152 MZF1
    - 2.3.3.0.153 ZNF530
    - 2.3.3.0.156 ZNF695
    - 2.3.3.0.157 ZNF879
    - 2.3.3.0.158 ZNF790
    - 2.3.3.0.167 ZNF551
    - 2.3.3.0.168 ZNF497
    - 2.3.3.0.169 ZSCAN10
    - 2.3.3.0.175 ZNF502
    - 2.3.3.0.176 ZNF835
    - 2.3.3.0.177 ZNF560
    - 2.3.3.0.179 ZNF667
    - 2.3.3.0.188 ZNF83
    - 2.3.3.0.189 ZNF528
    - 2.3.3.0.190 ZNF7
    - 2.3.3.0.204 ZNF16
    - 2.3.3.0.205 ZNF17
    - 2.3.3.0.207 ZNF534
    - 2.3.3.0.209 ZNF791
    - 2.3.3.0.217 ZNF749
    - 2.3.3.0.218 ZNF425
    - 2.3.3.0.229 ZNF493
    - 2.3.3.0.230 ZNF43
    - 2.3.3.0.231 ZFP62
    - 2.3.3.0.235 ZNF91
  - 2.3.4 Factors with multiple dispersed zinc fingers
  - 2.3.5 BED zinc finger factors
- 2.5 DM-type intertwined zinc finger factors
- 2.6 CXXC zinc finger factors
- 2.7 C2HC
- 2.8 C3H zinc finger factors
- 2.9 C2CH THAP-type zinc finger factors
3 Helix-turn-helix domains
4 Other all-alpha-helical DNA-binding domains
5 alpha-Helices exposed by beta-structures
6 Immunoglobulin fold
7 beta-Hairpin exposed by an alpha/beta-scaffold
8 beta-Sheet binding to DNA
9 beta-Barrel DNA-binding domains
0 Yet undefined DNA-binding domains

General

Species within this Genus: 31

Species specific reports

Jump to human, mouse or rat
Hint: You can rearrange the panels by drag-and-drop. The new arrangement will persist during your session.

Ailuropoda melanoleuca

Synonyms: giant panda

Outlinks

Ensembl gene: ENSAMEG00000004257

Bos taurus

Synonyms: cattle, domestic cow

Outlinks

Ensembl gene: ENSBTAG00000012772

Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

Outlinks

Ensembl gene: ENSCJAG00000018071

Canis lupus familiaris

Synonyms: dog, dogs

Outlinks

Ensembl: ENSCAFG00000019877

Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

Outlinks

Ensembl gene: ENSCPOG00000026928

Dasypus novemcinctus

Synonyms: nine-banded armadillo

Outlinks

Ensembl gene: ENSDNOG00000036528

Dipodomys ordii

Synonyms: Ord's kangaroo rat

Outlinks

Ensembl gene: ENSDORG00000000342
UniProt: NA

Echinops telfairi

Synonyms: small Madagascar hedgehog, lesser hedgehog tenrec

Outlinks

Ensembl gene: ENSETEG00000010167
UniProt: NA

Equus caballus

Synonyms: horse, equine

Outlinks

Ensembl gene: ENSECAG00000008127

Felis catus

Synonyms: domestic cat, cats

Outlinks

Ensembl gene: ENSFCAG00000027147

Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

Outlinks

Ensembl gene: ENSGGOG00000015828

Homo sapiens

Synonyms: human, man

Outlinks

BioGPS: ENSG00000165702
Ensembl gene: ENSG00000165702
ProteinAtlas: ENSG00000165702 ( with antibody)
TRANSFAC: T06586
UniProt: Q5VTD9

Protein expression pattern:Show tableIsoforms and DNA binding domain

Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

Outlinks

Ensembl gene: ENSSTOG00000022285
UniProt: NA

Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

Outlinks

Ensembl gene: ENSLAFG00000022367
UniProt: NA

Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

Outlinks

Ensembl gene: ENSMMUG00000005948
UniProt: F6UVT1

Isoforms and DNA binding domain

Monodelphis domestica

Synonyms: gray short-tailed opossum

Outlinks

Ensembl gene: ENSMODG00000012600
UniProt: NA

Mus musculus

Synonyms: house mouse, mouse

Outlinks

Ensembl gene: ENSMUSG00000026815
TRANSFAC: T06585
UniProt: O70237

Isoforms and DNA binding domain

Mustela putorius furo

Synonyms: domestic ferret, ferret

Outlinks

Ensembl: ENSMPUG00000012489

Myotis lucifugus

Synonyms: little brown bat

Outlinks

Ensembl gene: ENSMLUG00000006673
UniProt: NA

Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

Outlinks

Ensembl gene: ENSNLEG00000012963
UniProt: NA

Ornithorhynchus anatinus

Synonyms: platypus, duckbill platypus

Outlinks

Ensembl gene: ENSOANG00000014723
UniProt: NA

Oryctolagus cuniculus

Synonyms: rabbit, rabbits

Outlinks

Ensembl gene: ENSOCUG00000001793

Otolemur garnettii

Synonyms: small-eared galago

Outlinks

Ensembl gene: ENSOGAG00000008879

Ovis aries

Synonyms: sheep, wild sheep

Outlinks

Ensembl gene: ENSOARG00000005567

Pan troglodytes

Synonyms: chimpanzee

Outlinks

Ensembl gene: ENSPTRG00000021505

Pongo abelii

Synonyms: Sumatran orangutan, orang utan

Outlinks

Ensembl gene: ENSPPYG00000019718

Procavia capensis

Synonyms: Cape rock hyrax, rock hyrax

Outlinks

Ensembl gene: ENSPCAG00000012329
UniProt: NA

Rattus norvegicus

Synonyms: Norway rat, rats

Outlinks

Ensembl gene: ENSRNOG00000011353
UniProt: B0BN50

Isoforms and DNA binding domain

Sarcophilus harrisii

Synonyms: Tasmanian devil

Outlinks

Ensembl gene: ENSSHAG00000006462
UniProt: NA

Sus scrofa

Synonyms: pig, wild boar

Outlinks

Ensembl gene: ENSSSCG00000005737

Tarsius syrichta

Synonyms: Philippine tarsier

Outlinks

Ensembl: ENSTSYG00000006831

Select species

Selected the species for which a species report should be shown.

Ailuropoda melanoleuca, giant panda
Bos taurus, cattle
Callithrix jacchus, white-tufted-ear marmoset
Canis lupus familiaris, dog
Cavia porcellus, domestic guinea pig
Choloepus hoffmanni, Hoffmann's two-fingered sloth
Dasypus novemcinctus, nine-banded armadillo
Dipodomys ordii, Ord's kangaroo rat
Echinops telfairi, small Madagascar hedgehog
Equus caballus, horse
Erinaceus europaeus, western European hedgehog
Felis catus, domestic cat
Gorilla gorilla gorilla, western lowland gorilla
Homo sapiens, human
Ictidomys tridecemlineatus, thirteen-lined ground squirrel
Loxodonta africana, African savanna elephant
Macaca mulatta, Rhesus monkey
Macropus eugenii, tammar wallaby
Microcebus murinus, gray mouse lemur
Monodelphis domestica, gray short-tailed opossum
Mus musculus, house mouse
Mustela putorius furo, domestic ferret
Myotis lucifugus, little brown bat
Nomascus leucogenys, northern white-cheeked gibbon
Ochotona princeps, American pika
Ornithorhynchus anatinus, platypus
Oryctolagus cuniculus, rabbit
Otolemur garnettii, small-eared galago
Ovis aries, sheep
Pan troglodytes, chimpanzee
Pongo abelii, Sumatran orangutan
Procavia capensis, Cape rock hyrax
Pteropus vampyrus, large flying fox
Rattus norvegicus, Norway rat
Sarcophilus harrisii, Tasmanian devil
Sorex araneus, European shrew
Sus scrofa, pig
Tarsius syrichta, Philippine tarsier
Tupaia belangeri, northern tree shrew
Tursiops truncatus, bottlenose dolphin
Vicugna pacos, alpaca

Expression table

The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology

pp12345pp

Tissue	Cell type	Expression level	Type	Reliability
adrenal gland	glandular tissue	Moderate	Staining	Uncertain
appendix	glandular tissue	Weak	Staining	Uncertain
appendix	lymphoid tissue	Negative	Staining	Uncertain
bone barrow	hematopoetic stem cell	Moderate	Staining	Uncertain
breast	glandular tissue	Weak	Staining	Uncertain
bronchi	ciliated call with propulsive function of respiratory tract	Moderate	Staining	Uncertain
cerebellum	granule cell	Moderate	Staining	Uncertain
cerebellum		Weak	Staining	Uncertain
cerebellum	purkinje cell	Moderate	Staining	Uncertain
cerebral cortex	glial cell of central nervous system	Negative	Staining	Uncertain
cerebral cortex	neuron	Weak	Staining	Uncertain
cervix of uterus	glandular tissue	Weak	Staining	Uncertain
cervix of uterus	squamous epithelial cell	Negative	Staining	Uncertain
colon	glandular tissue	Negative	Staining	Uncertain
duodenum	glandular tissue	Weak	Staining	Uncertain

pp12345pp

Classification of Transcription Factors in Mammalia

About TFClass

Search in TFClass:

Species specific reports

Classification of Transcription Factors in Mammalia

About TFClass

Search in TFClass: ?PrimeFaces.cw('Button','widget_classificationForm_searchHelpButton',{id:'classificationForm:searchHelpButton'});

Species specific reports

Search in TFClass: