Classification of Transcription Factors in Mammalia

About TFClass

Search in TFClass:

Go to the search of TRANSFAC



Superclass: , Class: ,
Family: , Subfamily: , Genus: ,
  • 6 Immunoglobulin fold
    • 6.1 Rel homology region (RHR) factors
      • 6.1.4 CSL-related
General

Consensus binding sequenceCGTGGGAAPredicted binding sites For: human, mouse, cow, dogSpecies within this Subfamily: 32 Genera within this Subfamily: 2 LOGO plot of the DNA binding domain
FASTA file of the LogoPlot
DNA binding domain Whole protein
FASTA FASTA file FASTA file
Phylogenetic tree
Mammalia
  • Phylogenetic tree
    Phylogeny.fr and iTOL
  • Phylogenetic tree
    webPRANK and iTOL
  • Phylogenetic tree
    Phylogeny.fr and iTOL
Searches in the label, ID and external references.
These trees (or cladograms, since distances were ignored) were generated with a local installation of PhyML 3.0 (Guindon et al., Systematic Biology, 59(3):307-21, 2010.), by webPRANK at EBI (http://www.ebi.ac.uk/goldman-srv/webprank/), or by the web version of PhyML 3.0 (http://phylogeny.lirmm.fr). The resulting trees were visualized with iTOL v3 (http://itol.embl.de/).