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Classification of Transcription Factors in Mammalia

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Superclass: , Class: ,
Family: , Subfamily: , Genus: ,
  • 3 Helix-turn-helix domains
    • 3.1 Homeo domain factors
      • 3.1.2 NK
        • 3.1.2.11 MSX
General

Species within this Genus: 31 LOGO plot of the DNA binding sequence LOGO plot

Species specific reports

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Ailuropoda melanoleuca

Synonyms: giant panda

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Bos taurus

Synonyms: cattle, domestic cow

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Callithrix jacchus

Synonyms: white-tufted-ear marmoset, white ear-tufted marmoset

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Canis lupus familiaris

Synonyms: dog, dogs

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Cavia porcellus

Synonyms: domestic guinea pig, guinea pig

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Choloepus hoffmanni

Synonyms: Hoffmann's two-fingered sloth, Hoffmann's two-toed sloth

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Dasypus novemcinctus

Synonyms: nine-banded armadillo

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Echinops telfairi

Synonyms: small Madagascar hedgehog, lesser hedgehog tenrec

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Equus caballus

Synonyms: horse, equine

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Felis catus

Synonyms: domestic cat, cats

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Gorilla gorilla gorilla

Synonyms: western lowland gorilla, lowland gorilla

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Homo sapiens

Synonyms: human, man

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Protein expression pattern:Show table
Isoforms and DNA binding domain
Ictidomys tridecemlineatus

Synonyms: thirteen-lined ground squirrel

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Loxodonta africana

Synonyms: African savanna elephant, African savannah elephant

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Macaca mulatta

Synonyms: Rhesus monkey, rhesus monkeys

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Macropus eugenii

Synonyms: tammar wallaby

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Monodelphis domestica

Synonyms: gray short-tailed opossum

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Mus musculus

Synonyms: house mouse, mouse

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Isoforms and DNA binding domain
Mustela putorius furo

Synonyms: domestic ferret, ferret

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Nomascus leucogenys

Synonyms: northern white-cheeked gibbon, White-cheeked Gibbon

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Ochotona princeps

Synonyms: American pika, southern American pika

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Ornithorhynchus anatinus

Synonyms: platypus, duckbill platypus

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Ovis aries

Synonyms: sheep, wild sheep

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Pan troglodytes

Synonyms: chimpanzee

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Isoforms and DNA binding domain
Pongo abelii

Synonyms: Sumatran orangutan, orang utan

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Procavia capensis

Synonyms: Cape rock hyrax, rock hyrax

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Pteropus vampyrus

Synonyms: large flying fox

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Rattus norvegicus

Synonyms: Norway rat, rats

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Sarcophilus harrisii

Synonyms: Tasmanian devil

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Sus scrofa

Synonyms: pig, wild boar

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Tursiops truncatus

Synonyms: bottlenose dolphin, bottle-nosed dolphin

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Expression table
The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology
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TissueCell typeExpression levelTypeReliability
adrenal glandglandular tissueStrongStainingUncertain
appendixglandular tissueModerateStainingUncertain
appendixlymphoid tissueModerateStainingUncertain
bone barrowhematopoetic stem cellModerateStainingUncertain
breastglandular tissueModerateStainingUncertain
bronchiciliated call with propulsive function of respiratory tractStrongStainingUncertain
cerebellumgranule cellModerateStainingUncertain
cerebellumStrongStainingUncertain
cerebellumpurkinje cellStrongStainingUncertain
cerebral cortexglial cell of central nervous systemStrongStainingUncertain
cerebral cortexneuronStrongStainingUncertain
cervix of uterussquamous epithelial cellModerateStainingUncertain
colonglandular tissueWeakStainingUncertain
duodenumglandular tissueWeakStainingUncertain
epididymisglandular tissueModerateStainingUncertain
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